HL_7JQM_211
3D structure
- PDB id
- 7JQM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-002, mRNA, and deacylated P-site tRNA at 3.05A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- GG(5MC)UCAUAACC
- Length
- 11 nucleotides
- Bulged bases
- 7JQM|1|2x|U|33
- QA status
- Modified nucleotides: 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7JQM_211 not in the Motif Atlas
- Homologous match to HL_2BTE_002
- Geometric discrepancy: 0.2764
- The information below is about HL_2BTE_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7JQM|1|2x|G|30
7JQM|1|2x|G|31
7JQM|1|2x|5MC|32
7JQM|1|2x|U|33
7JQM|1|2x|C|34
7JQM|1|2x|A|35
7JQM|1|2x|U|36
7JQM|1|2x|A|37
7JQM|1|2x|A|38
7JQM|1|2x|C|39
7JQM|1|2x|C|40
Current chains
- Chain 2x
- P-site tRNA
Nearby chains
- Chain 2a
- Small subunit ribosomal RNA; SSU rRNA
- Chain 2i
- 30S ribosomal protein S9
- Chain 2m
- 30S ribosomal protein S13
- Chain 2v
- mRNA
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