HL_7JSS_024
3D structure
- PDB id
- 7JSS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUCAUCCCGAC
- Length
- 11 nucleotides
- Bulged bases
- 7JSS|1|1|C|888, 7JSS|1|1|C|889
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7JSS_024 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.3969
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_13963.3
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
7JSS|1|1|G|883
7JSS|1|1|U|884
7JSS|1|1|C|885
7JSS|1|1|A|886
7JSS|1|1|U|887
7JSS|1|1|C|888
7JSS|1|1|C|889
7JSS|1|1|C|890
7JSS|1|1|G|891
7JSS|1|1|A|892
7JSS|1|1|C|893
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain R
- 30S ribosomal protein S13
- Chain X
- 30S ribosomal protein S19
Coloring options: