HL_7JSS_096
3D structure
- PDB id
- 7JSS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UGAUAAA
- Length
- 7 nucleotides
- Bulged bases
- 7JSS|1|3|U|1168
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7JSS_096 not in the Motif Atlas
- Homologous match to HL_4LFB_027
- Geometric discrepancy: 0.3406
- The information below is about HL_4LFB_027
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.7
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 349
Unit IDs
7JSS|1|3|U|1165
7JSS|1|3|G|1166
7JSS|1|3|A|1167
7JSS|1|3|U|1168
7JSS|1|3|A|1169
7JSS|1|3|A|1170
7JSS|1|3|A|1171
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain G
- 30S ribosomal protein S2
- Chain Z
- 30S ribosomal protein S21
Coloring options: