HL_7JSZ_019
3D structure
- PDB id
- 7JSZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-IV)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUUAACUGG
- Length
- 9 nucleotides
- Bulged bases
- 7JSZ|1|1|U|646
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7JSZ_019 not in the Motif Atlas
- Geometric match to HL_5J7L_012
- Geometric discrepancy: 0.2859
- The information below is about HL_5J7L_012
- Detailed Annotation
- GNRA wlth extra near cWW
- Broad Annotation
- GNRA wlth extra near cWW
- Motif group
- HL_81538.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
7JSZ|1|1|C|640
7JSZ|1|1|U|641
7JSZ|1|1|U|642
7JSZ|1|1|A|643
7JSZ|1|1|A|644
7JSZ|1|1|C|645
7JSZ|1|1|U|646
7JSZ|1|1|G|647
7JSZ|1|1|G|648
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L33
- Chain E
- 50S ribosomal protein L35
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