HL_7JT1_052
3D structure
- PDB id
- 7JT1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CUGGGGCGG
- Length
- 9 nucleotides
- Bulged bases
- 7JT1|1|1|G|2250
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7JT1_052 not in the Motif Atlas
- Homologous match to HL_7A0S_052
- Geometric discrepancy: 0.1097
- The information below is about HL_7A0S_052
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_11974.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
7JT1|1|1|C|2248
7JT1|1|1|U|2249
7JT1|1|1|G|2250
7JT1|1|1|G|2251
7JT1|1|1|G|2252
7JT1|1|1|G|2253
7JT1|1|1|C|2254
7JT1|1|1|G|2255
7JT1|1|1|G|2256
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 5
- Transfer RNA; tRNA
- Chain 8
- Peptidyl-tRNA hydrolase ArfB
- Chain m
- 50S ribosomal protein L16
- Chain w
- 50S ribosomal protein L27
Coloring options: