HL_7JT1_066

3D structure

PDB id

7JT1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUUUAAG

Length

7 nucleotides

Bulged bases

7JT1|1|1|U|2797, 7JT1|1|1|A|2800

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7JT1_066 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.3794

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

7JT1|1|1|C|2795
7JT1|1|1|U|2796
7JT1|1|1|U|2797
7JT1|1|1|U|2798
7JT1|1|1|A|2799
7JT1|1|1|A|2800
7JT1|1|1|G|2801

Current chains

Chain 1

23S ribosomal RNA

Nearby chains