HL_7JT2_071
3D structure
- PDB id
- 7JT2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome stalled on long mRNA with ArfB bound in the A site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UUUGAUCAUGG
- Length
- 11 nucleotides
- Bulged bases
- 7JT2|1|3|U|14
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7JT2_071 not in the Motif Atlas
- Homologous match to HL_5J7L_001
- Geometric discrepancy: 0.1153
- The information below is about HL_5J7L_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89881.5
- Basepair signature
- cWW-tHW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7JT2|1|3|U|12
7JT2|1|3|U|13
7JT2|1|3|U|14
7JT2|1|3|G|15
7JT2|1|3|A|16
7JT2|1|3|U|17
7JT2|1|3|C|18
7JT2|1|3|A|19
7JT2|1|3|U|20
7JT2|1|3|G|21
7JT2|1|3|G|22
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain 8
- Peptidyl-tRNA hydrolase ArfB
- Chain J
- 30S ribosomal protein S5
- Chain Q
- 30S ribosomal protein S12
Coloring options: