HL_7K00_041

3D structure

PDB id

7K00 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome at 2 Angstrom Resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

1.98 Å

Loop

Sequence

UUUCGA

Length

6 nucleotides

Bulged bases

7K00|1|a|U|139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7K00_041 not in the Motif Atlas

Geometric match to HL_4PDB_001

Geometric discrepancy: 0.245

The information below is about HL_4PDB_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

7K00|1|a|U|137
7K00|1|a|U|138
7K00|1|a|U|139
7K00|1|a|C|140
7K00|1|a|G|141
7K00|1|a|A|142

Current chains

Chain a

23S rRNA

Nearby chains

Chain s

50S ribosomal protein L23