HL_7K00_069

3D structure

PDB id

7K00 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome at 2 Angstrom Resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

1.98 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

7K00|1|a|U|1396, 7K00|1|a|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7K00_069 not in the Motif Atlas

Homologous match to HL_5J7L_168

Geometric discrepancy: 0.0723

The information below is about HL_5J7L_168

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81545.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7K00|1|a|G|1389
7K00|1|a|U|1390
7K00|1|a|U|1391
7K00|1|a|A|1392
7K00|1|a|A|1393
7K00|1|a|U|1394
7K00|1|a|A|1395
7K00|1|a|U|1396
7K00|1|a|U|1397
7K00|1|a|C|1398

Current chains

Chain a

23S rRNA

Nearby chains

Chain s

50S ribosomal protein L23