HL_7K00_076

3D structure

PDB id

7K00 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome at 2 Angstrom Resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

1.98 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7K00|1|a|U|1693

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7K00_076 not in the Motif Atlas

Homologous match to HL_5J7L_175

Geometric discrepancy: 0.058

The information below is about HL_5J7L_175

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

7K00|1|a|C|1691
7K00|1|a|U|1692
7K00|1|a|U|1693
7K00|1|a|C|1694
7K00|1|a|G|1695
7K00|1|a|G|1696

Current chains

Chain a

23S rRNA

Nearby chains

Chain A

Small subunit ribosomal RNA; SSU rRNA

Chain c

50S ribosomal protein L2