HL_7K51_108

3D structure

PDB id

7K51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UCAUCCCGA

Length

9 nucleotides

Bulged bases

7K51|1|1|U|887

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7K51_108 not in the Motif Atlas

Geometric match to HL_4YAZ_004

Geometric discrepancy: 0.3072

The information below is about HL_4YAZ_004

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.3

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

7K51|1|1|U|884
7K51|1|1|C|885
7K51|1|1|A|886
7K51|1|1|U|887
7K51|1|1|C|888
7K51|1|1|C|889
7K51|1|1|C|890
7K51|1|1|G|891
7K51|1|1|A|892

Current chains

Chain 1

23S ribosomal RNA

Nearby chains