HL_7K52_022

3D structure

PDB id

7K52 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

7K52|1|1|A|781, 7K52|1|1|G|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7K52_022 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.3006

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

7K52|1|1|U|779
7K52|1|1|G|780
7K52|1|1|A|781
7K52|1|1|A|782
7K52|1|1|A|783
7K52|1|1|G|784
7K52|1|1|G|785

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain b

50S ribosomal protein L2