HL_7K52_066

3D structure

PDB id

7K52 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUUUAAG

Length

7 nucleotides

Bulged bases

7K52|1|1|U|2797, 7K52|1|1|A|2800

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7K52_066 not in the Motif Atlas

Geometric match to HL_7A0S_023

Geometric discrepancy: 0.384

The information below is about HL_7A0S_023

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

7K52|1|1|C|2795
7K52|1|1|U|2796
7K52|1|1|U|2797
7K52|1|1|U|2798
7K52|1|1|A|2799
7K52|1|1|A|2800
7K52|1|1|G|2801

Current chains

Chain 1

23S ribosomal RNA

Nearby chains