HL_7K54_035
3D structure
- PDB id
- 7K54 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GCGACGGUUGUC
- Length
- 12 nucleotides
- Bulged bases
- 7K54|1|1|A|1453, 7K54|1|1|C|1454, 7K54|1|1|U|1460
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7K54_035 not in the Motif Atlas
- Geometric match to HL_5J7L_200
- Geometric discrepancy: 0.304
- The information below is about HL_5J7L_200
- Detailed Annotation
- UNCG variation
- Broad Annotation
- UNCG variation
- Motif group
- HL_08100.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7K54|1|1|G|1450
7K54|1|1|C|1451
7K54|1|1|G|1452
7K54|1|1|A|1453
7K54|1|1|C|1454
7K54|1|1|G|1455
7K54|1|1|G|1456
7K54|1|1|U|1457
7K54|1|1|U|1458
7K54|1|1|G|1459
7K54|1|1|U|1460
7K54|1|1|C|1461
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain n
- 50S ribosomal protein L17
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