HL_7K55_101

3D structure

PDB id

7K55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGGAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7K55_101 not in the Motif Atlas

Homologous match to HL_4LFB_032

Geometric discrepancy: 0.1611

The information below is about HL_4LFB_032

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

7K55|1|3|G|1515
7K55|1|3|G|1516
7K55|1|3|G|1517
7K55|1|3|A|1518
7K55|1|3|A|1519
7K55|1|3|C|1520

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA