HL_7K55_108

3D structure

PDB id

7K55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCUCGCG

Length

7 nucleotides

Bulged bases

7K55|1|1|U|1729, 7K55|1|1|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7K55_108 not in the Motif Atlas

Homologous match to HL_5J7L_214

Geometric discrepancy: 0.2754

The information below is about HL_5J7L_214

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

7K55|1|1|C|1727
7K55|1|1|C|1728
7K55|1|1|U|1729
7K55|1|1|C|1730
7K55|1|1|G|1731
7K55|1|1|C|1732
7K55|1|1|G|1733

Current chains

Chain 1

23S ribosomal RNA

Nearby chains