HL_7K98_006
3D structure
- PDB id
- 7K98 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Preaminoacylation complex of M. tuberculosis PheRS with cognate precursor tRNA and 5'-O-(N-phenylalanyl)sulfamoyl-adenosine (F-AMS)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.19 Å
Loop
- Sequence
- GUUCGAUCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7K98_006 not in the Motif Atlas
- Homologous match to HL_7K98_003
- Geometric discrepancy: 0.052
- The information below is about HL_7K98_003
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 96
Unit IDs
7K98|1|F|G|54
7K98|1|F|U|55
7K98|1|F|U|56
7K98|1|F|C|57
7K98|1|F|G|58
7K98|1|F|A|59
7K98|1|F|U|60
7K98|1|F|C|61
7K98|1|F|C|62
Current chains
- Chain F
- tRNA(Phe)
Nearby chains
- Chain A
- Phenylalanine--tRNA ligase alpha subunit
Coloring options: