HL_7K9D_003

3D structure

PDB id

7K9D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Bacillus halodurans OapB in complex with its OLE RNA target (crystal form I)

Experimental method

X-RAY DIFFRACTION

Resolution

2.098 Å

Loop

Sequence

GGAAAUC

Length

7 nucleotides

Bulged bases

7K9D|1|B|U|533

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7K9D_003 not in the Motif Atlas

Geometric match to HL_7KKV_003

Geometric discrepancy: 0.1319

The information below is about HL_7KKV_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

7K9D|1|B|G|528
7K9D|1|B|G|529
7K9D|1|B|A|530
7K9D|1|B|A|531
7K9D|1|B|A|532
7K9D|1|B|U|533
7K9D|1|B|C|534

Current chains

Chain B

OLE* RNA

Nearby chains