HL_7KGA_004
3D structure
- PDB id
- 7KGA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of a mosquito-borne flavivirus dumbbell RNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.1 Å
Loop
- Sequence
- UAUCGGUUAGAG
- Length
- 12 nucleotides
- Bulged bases (A, C, G, U)
- 55U, 56C
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53845.3
- Basepair signature
- cWW-tSH
- Number of instances in this motif group
- 9
Unit IDs
7KGA|1|B|U|53
7KGA|1|B|A|54
7KGA|1|B|U|55
7KGA|1|B|C|56
7KGA|1|B|G|57
7KGA|1|B|G|58
7KGA|1|B|U|59
7KGA|1|B|U|60
7KGA|1|B|A|61
7KGA|1|B|G|62
7KGA|1|B|A|63
7KGA|1|B|G|64
Current chains
- Chain B
- RNA (90-MER)
Nearby chains
- Chain A
- Flavivirus DB element
Coloring options: