HL_7KGB_009

3D structure

PDB id

7KGB (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGCUACCCGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7KGB_009 not in the Motif Atlas

Geometric match to HL_4V9F_011

Geometric discrepancy: 0.258

The information below is about HL_4V9F_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

7KGB|1|A|C|337
7KGB|1|A|G|338
7KGB|1|A|C|339
7KGB|1|A|U|340
7KGB|1|A|A|341
7KGB|1|A|C|342
7KGB|1|A|C|343
7KGB|1|A|C|344
7KGB|1|A|G|345
7KGB|1|A|G|346

Current chains

Chain A

23S rRNA

Nearby chains