HL_7KGB_037

3D structure

PDB id

7KGB (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GUUGAUAUUC

Length

10 nucleotides

Bulged bases

7KGB|1|A|U|1527, 7KGB|1|A|U|1528

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7KGB_037 not in the Motif Atlas

Homologous match to HL_7RQB_036

Geometric discrepancy: 0.0948

The information below is about HL_7RQB_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69023.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7KGB|1|A|G|1520
7KGB|1|A|U|1521
7KGB|1|A|U|1522
7KGB|1|A|G|1523
7KGB|1|A|A|1524
7KGB|1|A|U|1525
7KGB|1|A|A|1526
7KGB|1|A|U|1527
7KGB|1|A|U|1528
7KGB|1|A|C|1529

Current chains

Chain A

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L23