HL_7KGB_046

3D structure

PDB id

7KGB (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CCUUGCG

Length

7 nucleotides

Bulged bases

7KGB|1|A|U|1963, 7KGB|1|A|C|1966

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7KGB_046 not in the Motif Atlas

Geometric match to HL_5J7L_018

Geometric discrepancy: 0.2019

The information below is about HL_5J7L_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37344.1

Basepair signature

cWW-F-F

Number of instances in this motif group

2

Unit IDs

7KGB|1|A|C|1961
7KGB|1|A|C|1962
7KGB|1|A|U|1963
7KGB|1|A|U|1964
7KGB|1|A|G|1965
7KGB|1|A|C|1966
7KGB|1|A|G|1967

Current chains

Chain A

23S rRNA

Nearby chains