HL_7KGB_066

3D structure

PDB id

7KGB (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7KGB_066 not in the Motif Atlas

Homologous match to HL_7RQB_063

Geometric discrepancy: 0.0696

The information below is about HL_7RQB_063

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

7KGB|1|A|C|2832
7KGB|1|A|G|2833
7KGB|1|A|U|2834
7KGB|1|A|G|2835
7KGB|1|A|A|2836
7KGB|1|A|G|2837

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain y

Transfer RNA; tRNA