HL_7KGB_079

3D structure

PDB id

7KGB (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGCUUUAG

Length

8 nucleotides

Bulged bases

7KGB|1|a|U|213, 7KGB|1|a|U|214, 7KGB|1|a|U|215

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7KGB_079 not in the Motif Atlas

Geometric match to HL_1KUQ_001

Geometric discrepancy: 0.2896

The information below is about HL_1KUQ_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.4

Basepair signature

cWW-tSW-F

Number of instances in this motif group

63

Unit IDs

7KGB|1|a|C|210
7KGB|1|a|G|211
7KGB|1|a|C|212
7KGB|1|a|U|213
7KGB|1|a|U|214
7KGB|1|a|U|215
7KGB|1|a|A|216
7KGB|1|a|G|217

Current chains

Chain a

16S rRNA

Nearby chains