HL_7KGB_105

3D structure

PDB id

7KGB (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CCUCGG

Length

6 nucleotides

Bulged bases

7KGB|1|a|U|1444

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7KGB_105 not in the Motif Atlas

Homologous match to HL_4LFB_031

Geometric discrepancy: 0.0928

The information below is about HL_4LFB_031

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.6

Basepair signature

cWW-tSW-F

Number of instances in this motif group

67

Unit IDs

7KGB|1|a|C|1442
7KGB|1|a|C|1443
7KGB|1|a|U|1444
7KGB|1|a|C|1445
7KGB|1|a|G|1446
7KGB|1|a|G|1447

Current chains

Chain a

16S rRNA

Nearby chains