HL_7L08_040

3D structure

PDB id

7L08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome-RRFmt complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

UUUGGUCCUAG

Length

11 nucleotides

Bulged bases

7L08|1|AA|U|656

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7L08_040 not in the Motif Atlas

Geometric match to HL_4LFB_001

Geometric discrepancy: 0.1672

The information below is about HL_4LFB_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_31940.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

7L08|1|AA|U|654
7L08|1|AA|U|655
7L08|1|AA|U|656
7L08|1|AA|G|657
7L08|1|AA|G|658
7L08|1|AA|U|659
7L08|1|AA|C|660
7L08|1|AA|C|661
7L08|1|AA|U|662
7L08|1|AA|A|663
7L08|1|AA|G|664

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AD

28S ribosomal protein S5, mitochondrial