HL_7L08_046

3D structure

PDB id

7L08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome-RRFmt complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7L08_046 not in the Motif Atlas

Geometric match to HL_4PQV_001

Geometric discrepancy: 0.2693

The information below is about HL_4PQV_001

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7L08|1|AA|C|842
7L08|1|AA|G|843
7L08|1|AA|A|844
7L08|1|AA|A|845
7L08|1|AA|A|846
7L08|1|AA|G|847

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A0

28S ribosomal protein S34, mitochondrial

Chain AM

28S ribosomal protein S16, mitochondrial

Chain AO

28S ribosomal protein S18b, mitochondrial

Chain AU

28S ribosomal protein S26, mitochondrial