HL_7L20_033

3D structure

PDB id

7L20 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and EF-G2mt.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

UGCAGCCG

Length

8 nucleotides

Bulged bases

7L20|1|A|G|3016

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7L20_033 not in the Motif Atlas

Homologous match to HL_4WF9_057

Geometric discrepancy: 0.2048

The information below is about HL_4WF9_057

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_46665.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

7L20|1|A|U|3015
7L20|1|A|G|3016
7L20|1|A|C|3017
7L20|1|A|A|3018
7L20|1|A|G|3019
7L20|1|A|C|3020
7L20|1|A|C|3021
7L20|1|A|G|3022

Current chains

Chain A

16S rRNA mitochondrial

Nearby chains

Chain 4

39S ribosomal protein L36, mitochondrial

Chain w

Ribosome-releasing factor 2, mitochondrial