HL_7LH5_012

3D structure

PDB id

7LH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

3.27 Å

Loop

Sequence

GAAACCCCCGACGAGGGGACUGAC

Length

24 nucleotides

Bulged bases

7LH5|1|AA|C|456, 7LH5|1|AA|A|461, 7LH5|1|AA|C|470

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LH5|1|AA|G|450
7LH5|1|AA|A|451
7LH5|1|AA|A|452
7LH5|1|AA|A|453
7LH5|1|AA|C|454
7LH5|1|AA|C|455
7LH5|1|AA|C|456
7LH5|1|AA|C|457
7LH5|1|AA|C|458
7LH5|1|AA|G|460
7LH5|1|AA|A|461
7LH5|1|AA|C|470
7LH5|1|AA|G|471
7LH5|1|AA|A|472
7LH5|1|AA|G|473
7LH5|1|AA|G|474
7LH5|1|AA|G|475
7LH5|1|AA|G|476
7LH5|1|AA|A|477
7LH5|1|AA|C|479
7LH5|1|AA|U|480
7LH5|1|AA|G|481
7LH5|1|AA|A|482
7LH5|1|AA|C|483

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AP

30S ribosomal protein S16