HL_7LH5_017
3D structure
- PDB id
- 7LH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.27 Å
Loop
- Sequence
- GGAUUAGAUACCC
- Length
- 13 nucleotides
- Bulged bases
- 7LH5|1|AA|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7LH5_017 not in the Motif Atlas
- Geometric match to HL_1KH6_003
- Geometric discrepancy: 0.3524
- The information below is about HL_1KH6_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7LH5|1|AA|G|785
7LH5|1|AA|G|786
7LH5|1|AA|A|787
7LH5|1|AA|U|788
7LH5|1|AA|U|789
7LH5|1|AA|A|790
7LH5|1|AA|G|791
7LH5|1|AA|A|792
7LH5|1|AA|U|793
7LH5|1|AA|A|794
7LH5|1|AA|C|795
7LH5|1|AA|C|796
7LH5|1|AA|C|797
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AK
- 30S ribosomal protein S11
- Chain AV
- Transfer RNA; tRNA
- Chain AW
- Transfer RNA; tRNA
- Chain AX
- mRNA
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
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