HL_7LH5_025

3D structure

PDB id

7LH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

3.27 Å

Loop

Sequence

UAGUUGCCAGCGGUUCGGCCGGGCACUCUA

Length

30 nucleotides

Bulged bases

7LH5|1|AA|U|1125, 7LH5|1|AA|A|1130, 7LH5|1|AA|G|1138

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LH5|1|AA|U|1122
7LH5|1|AA|A|1123
7LH5|1|AA|G|1124
7LH5|1|AA|U|1125
7LH5|1|AA|U|1126
7LH5|1|AA|G|1127
7LH5|1|AA|C|1128
7LH5|1|AA|C|1129
7LH5|1|AA|A|1130
7LH5|1|AA|G|1131
7LH5|1|AA|C|1132
7LH5|1|AA|G|1133
7LH5|1|AA|G|1134
7LH5|1|AA|U|1135
7LH5|1|AA|U|1136
7LH5|1|AA|C|1137
7LH5|1|AA|G|1138
7LH5|1|AA|G|1139
7LH5|1|AA|C|1140
7LH5|1|AA|C|1141
7LH5|1|AA|G|1142
7LH5|1|AA|G|1143
7LH5|1|AA|G|1144
7LH5|1|AA|C|1145
7LH5|1|AA|A|1146
7LH5|1|AA|C|1147
7LH5|1|AA|U|1148
7LH5|1|AA|C|1149
7LH5|1|AA|U|1150
7LH5|1|AA|A|1151

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AI

30S ribosomal protein S9

Chain AJ

30S ribosomal protein S10