HL_7LH5_063

3D structure

PDB id

7LH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

3.27 Å

Loop

Sequence

GGAUGAC

Length

7 nucleotides

Bulged bases

7LH5|1|BA|A|1174

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7LH5_063 not in the Motif Atlas

Geometric match to HL_4TUW_002

Geometric discrepancy: 0.3881

The information below is about HL_4TUW_002

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_12626.1

Basepair signature

cWW-F

Number of instances in this motif group

12

Unit IDs

7LH5|1|BA|G|1171
7LH5|1|BA|G|1173
7LH5|1|BA|A|1174
7LH5|1|BA|U|1175
7LH5|1|BA|G|1176
7LH5|1|BA|A|1177
7LH5|1|BA|C|1178

Current chains

Chain BA

23S ribosomal RNA

Nearby chains