HL_7LH5_169
3D structure
- PDB id
- 7LH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.27 Å
Loop
- Sequence
- CGCGAAGACAGCCAGGAGGUUGGCUUAGAAGCAGCCAUCCUUUAAAGAGUGCGUAAUAGCUCACUGGUCGAGUG
- Length
- 74 nucleotides
- Bulged bases
- 7LH5|1|DA|A|1046, 7LH5|1|DA|A|1054, 7LH5|1|DA|G|1055, 7LH5|1|DA|U|1060, 7LH5|1|DA|U|1066, 7LH5|1|DA|A|1077, 7LH5|1|DA|U|1078, 7LH5|1|DA|C|1079, 7LH5|1|DA|C|1080, 7LH5|1|DA|A|1084, 7LH5|1|DA|G|1106, 7LH5|1|DA|G|1107
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7LH5|1|DA|C|1041
7LH5|1|DA|G|1042
7LH5|1|DA|C|1043
7LH5|1|DA|G|1044
7LH5|1|DA|A|1045
7LH5|1|DA|A|1046
7LH5|1|DA|G|1047
7LH5|1|DA|A|1048
7LH5|1|DA|C|1049
7LH5|1|DA|A|1050
7LH5|1|DA|G|1051
7LH5|1|DA|C|1052
7LH5|1|DA|C|1053
7LH5|1|DA|A|1054
7LH5|1|DA|G|1055
7LH5|1|DA|G|1056
7LH5|1|DA|A|1057
7LH5|1|DA|G|1058
7LH5|1|DA|G|1059
7LH5|1|DA|U|1060
7LH5|1|DA|U|1061
7LH5|1|DA|G|1062
7LH5|1|DA|G|1063
7LH5|1|DA|C|1064
7LH5|1|DA|U|1065
7LH5|1|DA|U|1066
7LH5|1|DA|A|1067
7LH5|1|DA|G|1068
7LH5|1|DA|A|1069
7LH5|1|DA|A|1070
7LH5|1|DA|G|1071
7LH5|1|DA|C|1072
7LH5|1|DA|A|1073
7LH5|1|DA|G|1074
7LH5|1|DA|C|1075
7LH5|1|DA|C|1076
7LH5|1|DA|A|1077
7LH5|1|DA|U|1078
7LH5|1|DA|C|1079
7LH5|1|DA|C|1080
7LH5|1|DA|U|1081
7LH5|1|DA|U|1082
7LH5|1|DA|U|1083
7LH5|1|DA|A|1084
7LH5|1|DA|A|1085
7LH5|1|DA|A|1086
7LH5|1|DA|G|1087
7LH5|1|DA|A|1088
7LH5|1|DA|G|1089
7LH5|1|DA|U|1090
7LH5|1|DA|G|1091
7LH5|1|DA|C|1092
7LH5|1|DA|G|1093
7LH5|1|DA|U|1094
7LH5|1|DA|A|1095
7LH5|1|DA|A|1096
7LH5|1|DA|U|1097
7LH5|1|DA|A|1098
7LH5|1|DA|G|1099
7LH5|1|DA|C|1100
7LH5|1|DA|U|1101
7LH5|1|DA|C|1102
7LH5|1|DA|A|1103
7LH5|1|DA|C|1104
7LH5|1|DA|U|1105
7LH5|1|DA|G|1106
7LH5|1|DA|G|1107
7LH5|1|DA|U|1108
7LH5|1|DA|C|1109
7LH5|1|DA|G|1110
7LH5|1|DA|A|1111
7LH5|1|DA|G|1112
7LH5|1|DA|U|1113
7LH5|1|DA|G|1114
Current chains
- Chain DA
- 23S ribosomal RNA
Nearby chains
- Chain D9
- 50S ribosomal protein L36
- Chain DH
- 50S ribosomal protein L6
- Chain DJ
- 50S ribosomal protein L10
- Chain DK
- 50S ribosomal protein L11
- Chain DQ
- 50S ribosomal protein L16
- Chain DZ
- 50S ribosomal protein L25
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