HL_7LH5_195

3D structure

PDB id

7LH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

3.27 Å

Loop

Sequence

GGACGGAAAUC

Length

11 nucleotides

Bulged bases

7LH5|1|DA|A|2310, 7LH5|1|DA|A|2311

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7LH5_195 not in the Motif Atlas

Homologous match to HL_4WF9_051

Geometric discrepancy: 0.4024

The information below is about HL_4WF9_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LH5|1|DA|G|2303
7LH5|1|DA|G|2304
7LH5|1|DA|A|2305
7LH5|1|DA|C|2306
7LH5|1|DA|G|2307
7LH5|1|DA|G|2308
7LH5|1|DA|A|2309
7LH5|1|DA|A|2310
7LH5|1|DA|A|2311
7LH5|1|DA|U|2312
7LH5|1|DA|C|2313

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain CV

Transfer RNA; tRNA

Chain DB

5S ribosomal RNA; 5S rRNA

Chain DG

50S ribosomal protein L5