HL_7LH5_232

3D structure

PDB id

7LH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

3.27 Å

Loop

Sequence

GGGUCUCCU

Length

9 nucleotides

Bulged bases

7LH5|1|AA|U|839, 7LH5|1|AA|U|841, 7LH5|1|AA|C|848

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LH5|1|AA|G|836
7LH5|1|AA|G|837
7LH5|1|AA|G|838
7LH5|1|AA|U|839
7LH5|1|AA|C|840
7LH5|1|AA|U|841
7LH5|1|AA|C|848
7LH5|1|AA|C|849
7LH5|1|AA|U|850

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AB

30S ribosomal protein S2

Chain AF

30S ribosomal protein S6

Chain AR

30S ribosomal protein S18