HL_7LH5_233

3D structure

PDB id

7LH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

3.27 Å

Loop

Sequence

GCUAGGGGGCGCCUACCAAAC

Length

21 nucleotides

Bulged bases

7LH5|1|BA|G|879, 7LH5|1|BA|G|882, 7LH5|1|BA|G|892, 7LH5|1|BA|C|893, 7LH5|1|BA|A|896, 7LH5|1|BA|C|897, 7LH5|1|BA|A|899

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LH5|1|BA|G|875
7LH5|1|BA|C|876
7LH5|1|BA|U|877
7LH5|1|BA|A|878
7LH5|1|BA|G|879
7LH5|1|BA|G|880
7LH5|1|BA|G|881
7LH5|1|BA|G|882
7LH5|1|BA|G|883
7LH5|1|BA|C|884
7LH5|1|BA|G|892
7LH5|1|BA|C|893
7LH5|1|BA|C|894
7LH5|1|BA|U|895
7LH5|1|BA|A|896
7LH5|1|BA|C|897
7LH5|1|BA|C|898
7LH5|1|BA|A|899
7LH5|1|BA|A|900
7LH5|1|BA|A|901
7LH5|1|BA|C|902

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BQ

50S ribosomal protein L16

Chain BZ

50S ribosomal protein L25