HL_7LH5_238

3D structure

PDB id

7LH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

3.27 Å

Loop

Sequence

GGAGCCUGGCGCCGGUGAAAUC

Length

22 nucleotides

Bulged bases

7LH5|1|DA|C|2161, 7LH5|1|DA|C|2163

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LH5|1|DA|G|2124
7LH5|1|DA|G|2125
7LH5|1|DA|A|2126
7LH5|1|DA|G|2127
7LH5|1|DA|C|2128
7LH5|1|DA|C|2129
7LH5|1|DA|U|2130
7LH5|1|DA|G|2159
7LH5|1|DA|G|2160
7LH5|1|DA|C|2161
7LH5|1|DA|G|2162
7LH5|1|DA|C|2163
7LH5|1|DA|C|2164
7LH5|1|DA|G|2165
7LH5|1|DA|G|2166
7LH5|1|DA|U|2167
7LH5|1|DA|G|2168
7LH5|1|DA|A|2169
7LH5|1|DA|A|2170
7LH5|1|DA|A|2171
7LH5|1|DA|U|2172
7LH5|1|DA|C|2174

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain CW

Transfer RNA; tRNA

Chain DC

50S ribosomal protein L1