HL_7LS1_015
3D structure
- PDB id
- 7LS1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CUCGUCCGAAAG
- Length
- 12 nucleotides
- Bulged bases
- 7LS1|1|A2|C|1179, 7LS1|1|A2|G|1180, 7LS1|1|A2|U|1181, 7LS1|1|A2|A|1185
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7LS1|1|A2|C|1177
7LS1|1|A2|U|1178
7LS1|1|A2|C|1179
7LS1|1|A2|G|1180
7LS1|1|A2|U|1181
7LS1|1|A2|C|1182
7LS1|1|A2|C|1183
7LS1|1|A2|G|1184
7LS1|1|A2|A|1185
7LS1|1|A2|A|1186
7LS1|1|A2|A|1187
7LS1|1|A2|G|1188
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain C2
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain F1
- 60S ribosomal protein L13
- Chain F2
- 60S ribosomal protein L4
- Chain H1
- 60S ribosomal protein L15
- Chain S2
- 60S ribosomal protein L26
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