HL_7LS1_024

3D structure

PDB id

7LS1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GCCGAAACGAUC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS1|1|A2|G|1563
7LS1|1|A2|C|1564
7LS1|1|A2|C|1565
7LS1|1|A2|G|1566
7LS1|1|A2|A|1567
7LS1|1|A2|A|1568
7LS1|1|A2|A|1569
7LS1|1|A2|C|1570
7LS1|1|A2|G|1571
7LS1|1|A2|A|1572
7LS1|1|A2|U|1573
7LS1|1|A2|C|1574

Current chains

Chain A2

28S rRNA

Nearby chains

Chain m2

Small subunit ribosomal RNA; SSU rRNA

Chain x2

40S ribosomal protein S15