HL_7LS1_078
3D structure
- PDB id
- 7LS1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GUGAAUUGCAGGACACAUUGAUC
- Length
- 23 nucleotides
- Bulged bases
- 7LS1|1|C2|U|86
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7LS1|1|C2|G|68
7LS1|1|C2|U|69
7LS1|1|C2|G|70
7LS1|1|C2|A|71
7LS1|1|C2|A|72
7LS1|1|C2|U|73
7LS1|1|C2|U|74
7LS1|1|C2|G|75
7LS1|1|C2|C|76
7LS1|1|C2|A|77
7LS1|1|C2|G|78
7LS1|1|C2|G|79
7LS1|1|C2|A|80
7LS1|1|C2|C|81
7LS1|1|C2|A|82
7LS1|1|C2|C|83
7LS1|1|C2|A|84
7LS1|1|C2|U|85
7LS1|1|C2|U|86
7LS1|1|C2|G|87
7LS1|1|C2|A|88
7LS1|1|C2|U|89
7LS1|1|C2|C|90
Current chains
- Chain C2
- 5.8S rRNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain S2
- 60S ribosomal protein L26
- Chain b2
- 60S ribosomal protein L35
- Chain d2
- 60S ribosomal protein L37
- Chain f2
- 60S ribosomal protein L39
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