HL_7LS1_093

3D structure

PDB id

7LS1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUCCACUUUAAAUCCUUUAAC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS1|1|m2|G|567
7LS1|1|m2|U|568
7LS1|1|m2|C|569
7LS1|1|m2|C|570
7LS1|1|m2|A|571
7LS1|1|m2|C|572
7LS1|1|m2|U|573
7LS1|1|m2|U|574
7LS1|1|m2|U|575
7LS1|1|m2|A|576
7LS1|1|m2|A|577
7LS1|1|m2|A|578
7LS1|1|m2|U|579
7LS1|1|m2|C|580
7LS1|1|m2|C|581
7LS1|1|m2|U|582
7LS1|1|m2|U|583
7LS1|1|m2|U|584
7LS1|1|m2|A|585
7LS1|1|m2|A|586
7LS1|1|m2|C|587

Current chains

Chain m2

28S rRNA

Nearby chains

Chain L3

40S ribosomal protein S9

Chain Q3

40S ribosomal protein S24