HL_7LS1_095

3D structure

PDB id

7LS1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GCGGGCGUCCCCGC

Length

14 nucleotides

Bulged bases

7LS1|1|m2|C|732

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS1|1|m2|G|696
7LS1|1|m2|C|697
7LS1|1|m2|G|698
7LS1|1|m2|G|699
7LS1|1|m2|G|700
7LS1|1|m2|C|732
7LS1|1|m2|G|733
7LS1|1|m2|U|734
7LS1|1|m2|C|735
7LS1|1|m2|C|736
7LS1|1|m2|C|737
7LS1|1|m2|C|738
7LS1|1|m2|G|739
7LS1|1|m2|C|740

Current chains

Chain m2

28S rRNA

Nearby chains

Chain P3

40S ribosomal protein S15a

Chain t

40S ribosomal protein S7