HL_7LS1_098

3D structure

PDB id

7LS1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AUUUUGUUGGUUUU

Length

14 nucleotides

Bulged bases

7LS1|1|m2|U|889

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS1|1|m2|A|888
7LS1|1|m2|U|889
7LS1|1|m2|U|890
7LS1|1|m2|U|891
7LS1|1|m2|U|892
7LS1|1|m2|G|893
7LS1|1|m2|U|894
7LS1|1|m2|U|895
7LS1|1|m2|G|896
7LS1|1|m2|G|897
7LS1|1|m2|U|898
7LS1|1|m2|U|899
7LS1|1|m2|U|900
7LS1|1|m2|U|901

Current chains

Chain m2

28S rRNA

Nearby chains

Chain K3

40S ribosomal protein S6