HL_7LS1_102

3D structure

PDB id

7LS1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUAUUCCCAUGA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS1|1|m2|U|1113
7LS1|1|m2|U|1114
7LS1|1|m2|A|1115
7LS1|1|m2|U|1116
7LS1|1|m2|U|1117
7LS1|1|m2|C|1118
7LS1|1|m2|C|1119
7LS1|1|m2|C|1120
7LS1|1|m2|A|1121
7LS1|1|m2|U|1122
7LS1|1|m2|G|1123
7LS1|1|m2|A|1124

Current chains

Chain m2

28S rRNA

Nearby chains

Chain S3

40S ribosomal protein S27-like

Chain p2

40S ribosomal protein S3a

Chain z2

40S ribosomal protein S17