HL_7LS1_124

3D structure

PDB id

7LS1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UGUCAAACGGUA(6MZ)CGCA

Length

17 nucleotides

Bulged bases

7LS1|1|A2|A|3866, 7LS1|1|A2|C|3873

QA status

Modified nucleotides: 6MZ

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS1|1|A2|U|3860
7LS1|1|A2|G|3861
7LS1|1|A2|U|3862
7LS1|1|A2|C|3863
7LS1|1|A2|A|3864
7LS1|1|A2|A|3865
7LS1|1|A2|A|3866
7LS1|1|A2|C|3867
7LS1|1|A2|G|3868
7LS1|1|A2|G|3869
7LS1|1|A2|U|3870
7LS1|1|A2|A|3871
7LS1|1|A2|6MZ|3872
7LS1|1|A2|C|3873
7LS1|1|A2|G|3874
7LS1|1|A2|C|3875
7LS1|1|A2|A|3876

Current chains

Chain A2

28S rRNA

Nearby chains

Chain D1

60S ribosomal protein L10-like

Chain N2

60S ribosomal protein L21

Chain V2

60S ribosomal protein L29