HL_7LS1_127

3D structure

PDB id

7LS1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UGUGGUAAUUCUAG(A2M)

Length

15 nucleotides

Bulged bases

7LS1|1|m2|U|161

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS1|1|m2|U|152
7LS1|1|m2|G|153
7LS1|1|m2|U|154
7LS1|1|m2|G|155
7LS1|1|m2|G|156
7LS1|1|m2|U|157
7LS1|1|m2|A|158
7LS1|1|m2|A|159
7LS1|1|m2|U|160
7LS1|1|m2|U|161
7LS1|1|m2|C|162
7LS1|1|m2|U|163
7LS1|1|m2|A|164
7LS1|1|m2|G|165
7LS1|1|m2|A2M|166

Current chains

Chain m2

28S rRNA

Nearby chains

Chain K3

40S ribosomal protein S6

Chain Q2

60S ribosomal protein L24

Chain Q3

40S ribosomal protein S24