HL_7LV0_032

3D structure

PDB id

7LV0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUAAUC

Length

7 nucleotides

Bulged bases

7LV0|1|1|U|1325, 7LV0|1|1|U|1329

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7LV0_032 not in the Motif Atlas

Homologous match to HL_4WF9_033

Geometric discrepancy: 0.2077

The information below is about HL_4WF9_033

Detailed Annotation

Pseudoknot geometry with 3' bulge

Broad Annotation

No text annotation

Motif group

HL_57176.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

14

Unit IDs

7LV0|1|1|G|1324
7LV0|1|1|U|1325
7LV0|1|1|U|1326
7LV0|1|1|A|1327
7LV0|1|1|A|1328
7LV0|1|1|U|1329
7LV0|1|1|C|1330

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain n

50S ribosomal protein L17

Chain s

50S ribosomal protein L22