HL_7LVK_028

3D structure

PDB id

7LVK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cfr-modified 50S subunit from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

7LVK|1|I|A|1070

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7LVK_028 not in the Motif Atlas

Homologous match to HL_5J7L_161

Geometric discrepancy: 0.2267

The information below is about HL_5J7L_161

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7LVK|1|I|C|1064
7LVK|1|I|U|1065
7LVK|1|I|U|1066
7LVK|1|I|A|1067
7LVK|1|I|G|1068
7LVK|1|I|A|1069
7LVK|1|I|A|1070
7LVK|1|I|G|1071
7LVK|1|I|C|1072
7LVK|1|I|A|1073
7LVK|1|I|G|1074

Current chains

Chain I

23S rRNA

Nearby chains