HL_7M4W_002

3D structure

PDB id

7M4W (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S Empty

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

GGCGGCAAAUAUCC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4W_002 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.2855

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

7M4W|1|A|G|92
7M4W|1|A|G|93
7M4W|1|A|C|94
7M4W|1|A|G|95
7M4W|1|A|G|96
7M4W|1|A|C|97
7M4W|1|A|A|98
7M4W|1|A|A|99
7M4W|1|A|A|100
7M4W|1|A|U|101
7M4W|1|A|A|102
7M4W|1|A|U|103
7M4W|1|A|C|104
7M4W|1|A|C|105

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain S

50S ribosomal protein L23

Chain T

50S ribosomal protein L24

Chain X

50S ribosomal protein L29