HL_7M4W_015

3D structure

PDB id

7M4W (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S Empty

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

CUGUGAG

Length

7 nucleotides

Bulged bases

7M4W|1|A|U|489

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4W_015 not in the Motif Atlas

Homologous match to HL_7RQB_016

Geometric discrepancy: 0.1618

The information below is about HL_7RQB_016

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

7M4W|1|A|C|486
7M4W|1|A|U|487
7M4W|1|A|G|488
7M4W|1|A|U|489
7M4W|1|A|G|490
7M4W|1|A|A|491
7M4W|1|A|G|492

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain R

50S ribosomal protein L22